Persistent Homology of Asymmetric Networks: an Approach Based on Dowker Filtrations

نویسنده

  • SAMIR CHOWDHURY
چکیده

We propose methods for computing two network features with topological underpinnings: the Rips and Dowker Persistent Homology Diagrams. Our formulations work for general networks, which may be asymmetric and may have any real number as an edge weight. We study the sensitivity of Dowker persistence diagrams to intrinsic asymmetry in the data, and investigate the stability properties of both the Dowker and Rips persistence diagrams. We include detailed experiments run on a variety of simulated and real world datasets using our methods.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Computational Topology in Neuroscience

Computational topology is a set of algorithmic methods developed to understand topological invariants such as loops and holes in high-dimensional data sets. In particular, a method know as persistent homology has been used to understand such shapes and their persistence in point clouds and networks. It has only been applied to neuronal networks in recent years. While most tools from network sci...

متن کامل

Morse Theory for Filtrations and Efficient Computation of Persistent Homology

We introduce an efficient preprocessing algorithm to reduce the number of cells in a filtered cell complex while preserving its persistent homology groups. The technique is based on an extension of combinatorial Morse theory from complexes to filtrations.

متن کامل

Matroid Filtrations and Computational Persistent Homology

This technical report introduces a novel approach to efficient computation in homological algebra over fields, with particular emphasis on computing the persistent homology of a filtered topological cell complex. The algorithms here presented rely on a novel relationship between discrete Morse theory, matroid theory, and classical matrix factorizations. We provide background, detail the algorit...

متن کامل

Persistent homology in graph power filtrations

The persistence of homological features in simplicial complex representations of big datasets in R n resulting from Vietoris-Rips or Čech filtrations is commonly used to probe the topological structure of such datasets. In this paper, the notion of homological persistence in simplicial complexes obtained from power filtrations of graphs is introduced. Specifically, the rth complex, r ≥ 1, in su...

متن کامل

The Topological "Shape" of Brexit

Persistent homology is a method from computational algebraic topology that can be used to study the “shape” of data. We illustrate two filtrations — the weight rank clique filtration and the Vietoris–Rips (VR) filtration — that are commonly used in persistent homology, and we apply these filtrations to a pair of data sets that are both related to the 2016 European Union “Brexit” referendum in t...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:

دوره   شماره 

صفحات  -

تاریخ انتشار 2016